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Abiotrophiaadjacens毗邻贫养菌Abiotrophiadefectiva软弱贫养菌Achromobacterspp无色杆菌属某些种Acinetobacter/Pseudomonasspp不动杆菌/假单胞菌属某些种Acinetobacterbaumannii鲍氏不动杆菌Acinetobactercalcoaceticus醋酸钙不动杆菌Acinetobacterhaemolyticus溶血不动杆菌Acinetobacterjohnsonii约氏不动杆菌Acinetobacterjunii琼氏不动杆菌Acinetobacterlwoffii鲁氏不动杆菌Acinetobacterradioresistens抗辐射不动杆菌Acinetobacterspp不动杆菌属某些种Acinetobacterspp/Pseudomonasspp不动杆菌属某些种/假单胞菌属某些种Acinetobacter/Pseudomonasspp不动杆菌/假单胞菌属某些种Actinobacillusactinomycetemcomitans伴放线放线杆菌Actinomycesisraelii衣氏放线菌Actinomycesmeyeri麦氏放线菌Actinomycesnaeslundii内氏放线菌Actinomycesneuiianitratus纽氏放线菌无硝亚种Actinomycesneuiineuii纽氏放线菌纽氏亚种Actinomycesneuiiradingae纽氏放线菌罗亚种Actinomycesneuiituricensis纽氏放线菌图列茨亚种Actinomycesodontolyticus龋齿放线菌Actinomycesviscosus粘放线菌Aerococcusviridans绿浅气球菌Aeromonascaviae豚鼠气单胞菌Aeromonashydrophila嗜水气单胞菌Aeromonashydrophilagr.嗜水气单胞菌群Aeromonassalmonicidaachromogenes杀鲑气单胞菌无色亚种Aeromonassalmonicidamasoucida杀鲑气单胞菌杀日本鲑亚种Aeromonassalmonicidasalmonicida杀鲑气单胞菌杀鲑亚种Aeromonassobria温和气单胞菌Agrobacteriumradiobacter放射形土壤杆菌Alcaligenesdenitrificans反硝化产碱菌Alcaligenesfaecalis粪产碱菌Alcaligenesspp产碱菌属某些种Alcaligenesxylosoxidans木糖氧化产碱菌Alloiococcusotitis耳炎差异球菌Anaerobiospirllumsucciniproducens产琥珀酸厌氧螺菌Arachniapropionica丙酸蛛菌Arcanobacteriumbernardiae伯纳德隐秘杆菌Arcanobacteriumhaemolyticum溶血隐秘杆菌Arcanobacteriumpyogenes化脓隐秘杆菌Arcobactercryaerohoilus嗜低温弓形杆菌Arthrobacterspp节杆菌属某些种Bacteroidescaccae粪拟杆菌Bacteroidescapillosus多毛拟杆菌Bacteroideseggerthii埃氏拟杆菌Bacteroidesfragilis脆弱拟杆菌Bacteroideslevii利氏拟杆菌Bacteroidesmerdae屎拟杆菌Bacteroidesovatus卵形拟杆菌Bacteroidesstercoris粪便拟杆菌Bacteroidesthetaiotaomicron多形拟杆菌Bacteroidesuniformis单形拟杆菌Bacteroidesureolyticus解脲拟杆菌Bacteroidesvulgatus普通拟杆菌Bergeyellazoohelcum动物溃疡伯格菌Bifidobacteriumadolescentis青春双岐杆菌Bifidobacteriumbifidum双岐双岐杆菌Bifidobacteriumbreve短双岐杆菌Bifidobacteriumdentium齿双歧杆菌Bifidobacteriuminfantis婴儿双岐杆菌Bifidobacteriumspp双岐杆菌属某些种Bordetellaavium鸟博德特菌Bordetellabronchiseptica支气管炎博德特菌Bordetellaspp博德特菌属某些种Branhamellacatarrhalis粘膜炎布兰汉球菌Brevendimonasdiminuta缺陷短波单胞菌Brevendimonasvesicularis泡囊短波单胞菌Brevibacteriumcasei乳酪短杆菌Brevibacteriumepidermidis表皮短杆菌Brevibacteriumspp短杆菌属某些种Brucellaspp布鲁菌属某些种Budviciaaquatica水生布戴约维采菌Burkholderiacepacia洋葱伯克霍尔德菌Burkholderiadiminuta洋葱伯克霍尔德菌Burkholderiagladioli唐菖蒲伯克霍尔德菌Burkholderiapseudomallei类鼻疽伯克霍尔德菌Buttiauxellaagrestis乡间布丘菌Campylobactercoli大肠弯曲杆菌Campylobacterfetusfetus胚胎弯曲杆菌胚胎亚种Campylobacterfetusvenerealis胚胎弯曲杆菌性病亚种Campylobacterhyointestinalis豚肠弯曲杆菌Campylobacterjejunidoylei空肠弯曲杆菌德莱亚种Campylobacterjejunijejuni空肠弯曲杆菌空肠亚种Campylobacterlari红嘴鸥弯曲杆菌CampylobacterlariUPTC红嘴鸥弯曲杆菌UPTC变种Campylobactermucosalis粘膜弯曲杆菌Campylobactersputorrumbubulus唾液弯曲杆菌牛生物变种Campylobactersputorrumfecalis唾液弯曲杆菌粪生物变种Campylobacterupsaliensis乌普萨拉弯曲杆菌Candidaalbicans白假丝酵母Candidaboidinii博伊丁假丝酵母Candidacatenulata链状假丝酵母Candidaciferrii西弗假丝酵母Candidacolliculosa软假丝酵母Candidacurvata弯假丝酵母Candidadattiladattila假丝酵母Candidadrusei克鲁斯假丝酵母Candidadubliniensis杜氏假丝酵母Candidafamata无名假丝酵母Candidaglabrata光滑假丝酵母Candidaglobosa球形假丝酵母Candidaguilliermondii高里假丝酵母Candidahellenical(=C.steatolytica)Candidaholmii霍氏假丝酵母Candidainconspicua平常假丝酵母Candidaintermedia中间假丝酵母Candidakefyr乳酒假丝酵母Candidakrusei克柔假丝酵母Candidalambica郎比可假丝酵母Candidalipolytica解脂假丝酵母Candidalusitaniae葡萄牙假丝酵母Candidamagnoliae木兰假丝酵母Candidamelibiosica口津假丝酵母Candidamembranaefaciens璞膜假丝酵母Candidanorvegensis挪威假丝酵母Candidanorvegicanorvegica假丝酵母Candidaparapsilosis近平滑假丝酵母Candidapelliculosa菌膜假丝酵母Candidapulcherrima铁红假丝酵母Candidarugosa皱落假丝酵母Candidarugosa皱褶假丝酵母Candidasake清酒假丝酵母Candidasilvicola森林假丝酵母Candidasphaerica园球形假丝酵母Candidatropicalis热带假丝酵母Candidautilis产朊假丝酵母Candidavalida粗状假丝酵母Candidazeylanoides诞沫假丝酵母Capnocytophagagingivalis牙龈二氧化碳嗜纤维菌Capnocytophagaochracea黄褐二氧化碳嗜纤维菌Capnocytophagaspp二氧化碳嗜纤维菌属某些种Capnocytophagasputigena生痰二氧化碳嗜纤维菌CDCgruopIVC-2CDC菌群IVC-2Cedeceadavisae戴氏西地西菌Cedecealapagei拉氏西地西菌Cedeceaneteri奈氏西地西菌Cedeceaspp西地西菌属某些种Cellulomonasspp纤维单胞菌属某些种Cellulomonasturbata特氏纤维单胞菌Ceotruchumcandidum假丝地霉Ceotruchumcapitatum头状地霉Ceotruchumfermenfans发酵地霉Ceotruchumpenicillatum潘氏地霉Ceotruchumspp地霉菌属某些种Chromobacteriumviolaceum紫色色杆菌Chryseobacteriumindologenes产吲哚金黄杆菌Chryseobacteriummeningosepticum脑膜脓毒性金黄杆菌Chryseomonasluteola浅黄金色单胞菌Citrobacteramalonaticua无丙二酸柠檬酸杆菌Citrobacterbraakii布氏柠檬酸杆菌Citrobacterfarmeri法氏柠檬酸杆菌Citrobacterfreundii弗氏柠檬酸杆菌Citrobacterfreundiigroup弗氏柠檬酸杆菌群Citrobacterkoseri柯氏柠檬酸杆菌Citrobacterkoseri克氏柠檬酸杆菌Citrobacterkoseri(=C.diversus)克氏柠檬酸杆菌（=差异柠檬酸杆菌）Citrobacterkoseri/amalonaticus克氏/无丙二酸柠檬酸杆菌Citrobacteryoungae杨氏柠檬酸杆菌Clostridiumacetobutylicum丙酮丁醇梭杆菌Clostridiumbarati巴氏梭菌Clostridiumbeijerinckii拜氏梭菌Clostridiumbeijerinckii/butyricum拜氏/丁酸梭菌Clostridiumbifermentans双酶梭菌Clostridiumbotlinum肉毒梭菌Clostridiumbutyricum丁酸梭菌Clostridiumcadaveris尸毒梭菌Clostridiumclostridiiforme梭状梭菌Clostridiumdifficile艰难梭菌Clostridiumfallax谲诈梭菌Clostridiumglycolicum乙二醇梭菌Clostridiumhastiforme矛形梭菌Clostridiumhistolyticum溶组织梭菌Clostridiuminnocuum无害梭菌Clostridiuminnocuum无害芽胞梭菌Clostridiumlimosum泥渣梭菌Clostridiumparaputrificum类腐败梭菌Clostridiumperfringens产气荚膜梭菌Clostridiumramosum多枝梭菌Clostridiumsepticum败毒梭菌Clostridiumsordellii索氏梭菌Clostridiumsporogenes生孢梭菌Clostridiumspp梭菌属某些种Clostridiumsubterminale近端梭菌Clostridium